ACL RD-TEC 1.0 Summarization of W06-3306
Paper Title:
HUMAN GENE NAME NORMALIZATION USING TEXT MATCHING WITH AUTOMATICALLY EXTRACTED SYNONYM DICTIONARIES
HUMAN GENE NAME NORMALIZATION USING TEXT MATCHING WITH AUTOMATICALLY EXTRACTED SYNONYM DICTIONARIES
Authors: Haw-ren Fang and Kevin Murphy and Yang Jin and Jessica Kim and Peter White
Primarily assigned technology terms:
- algorithm
- approximate matching
- approximate string matching
- automated process
- biomedical information extraction
- classification
- classification techniques
- computational biology
- database
- database curation
- databases
- disambiguation
- entity identification
- entity normalization
- entity recognition
- factoring
- genbank sequence identifier
- gene name normalization
- gene normalization
- gene tagger
- grouping
- human gene identification
- human gene normalization
- identification
- information extraction
- information extraction tasks
- information retrieval
- machine-learning
- matching
- name identification
- name normalization
- named entity recognition
- normalization
- normalization procedure
- normalization process
- porter stemmer
- recognition
- relation extraction
- reporting
- retrieving
- scoring
- scoring method
- simultaneous invocation
- spelling
- stemmer
- string matching
- tagger
- tagger implementation
- tagger training
- tagging
- text matching
- tokenization
Other assigned terms:
- ambiguity
- ambiguity rate
- annotation
- annotators
- approach
- biology
- biomedical information
- biomedical literature
- biomedical text
- case
- characters
- data sets
- dictionaries
- dictionary
- distance metric
- distribution
- document
- drosophila
- entity class
- evaluations
- experimental results
- f-measure
- fact
- gene name
- gene names
- gold standard
- human gene name
- human intervention
- implementation
- information sources
- invocation
- knowledge
- lexicon
- measure
- medline
- method
- named entity
- names
- precision
- procedure
- process
- punctuation
- query
- relation
- rule set
- rule sets
- semantic
- standard deviation
- statistics
- symbol
- symbols
- synonym
- synonym dictionary
- synonyms
- system performance
- term
- terms
- text
- training
- transformation
- transformation rules
- user
- vocabulary
- vocabulary source
- word
- words
