ACL RD-TEC 1.0 Summarization of W05-1307
Paper Title:
USING BIOMEDICAL LITERATURE MINING TO CONSOLIDATE THE SET OF KNOWN HUMAN PROTEIN-PROTEIN INTERACTIONS
USING BIOMEDICAL LITERATURE MINING TO CONSOLIDATE THE SET OF KNOWN HUMAN PROTEIN-PROTEIN INTERACTIONS
Authors: Arun Ramani and Razvan Bunescu and Raymond Mooney and Edward Marcotte
Primarily assigned technology terms:
- algorithm
- automatic text classification
- automatic text mining
- bayes classifier
- bayesian classification
- bayesian classifier
- bayesian classifier analysis
- capitalization
- classification
- classifier
- computing
- conditional random field
- conditional random fields
- cross-validation
- database
- databases
- dynamic programming
- dynamic programming algorithm
- estimator
- extraction algorithm
- extractor
- feature selection
- greedy learning
- identification
- information extraction
- interaction extraction
- kernel
- kernel computation
- kernels
- knowledge bases
- learning
- learning procedure
- linking
- matching
- maximum entropy
- maximum entropy approach
- measuring
- mining
- naive bayes
- naive bayes classifier
- name identification
- name tagging
- programming algorithm
- protein tagger
- ranking
- retrieving
- rule representation
- rule-based system
- scoring
- string kernel
- support vector machines
- support-vector machine
- svm learning
- tagger
- tagging
- text classification
- text mining
- text mining system
- unification
Other assigned terms:
- 10-fold cross-validation
- annotation
- annotation set
- approach
- benchmark
- bias
- binary features
- binary relations
- biomedical literature
- crf model
- data set
- data sets
- dictionary
- dimensionality
- distribution
- entropy
- entropy models
- experimental results
- fact
- feature
- feature space
- functional annotation set
- gene name
- gene names
- gene ontology
- gold standard
- implementation
- knowledge
- likelihood
- likelihood ratio
- locuslink
- maximum entropy models
- measure
- medline
- method
- names
- natural language
- ontologies
- ontology
- part-of-speech
- part-of-speech tags
- precision
- probabilistic model
- probabilistic models
- probability
- procedure
- process
- protein names
- punctuation
- punctuation marks
- relation
- scoring scheme
- sentence
- sentences
- support vector
- synonyms
- tags
- text
- theorem
- tokens
- training
- training data
- training dataset
- word
- words
